BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020G11SP1|AL427675
(940 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1479 1809 0.0
>3x_Contig1479
Length = 7316
Score = 1809 bits (905), Expect = 0.0
Identities = 918/929 (98%)
Strand = Plus / Minus
Query: 2 atcgttccatcgtcaccggacacatcactaccactctggatgacaatgagcgtcgcgctg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7004 atcgttccatcgtcaccggacacatcactaccactctggatgacaatgagcgtcgcgctg 6945
Query: 62 catcgattagttccgcttctgaccatcaccataaggcatcgtcgcacagattttccctgc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6944 catcgattagttccgcttctgaccatcaccataaggcatcgtcgcacagattttccctgc 6885
Query: 122 ctaatctattccattccattcgtcgtataaacccaagtaccaatcatccttccgtatcgg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6884 ctaatctattccattccattcgtcgtataaacccaagtaccaatcatccttccgtatcgg 6825
Query: 182 tggtatctgaagggcaggatcctagaagacactcactaaaccaagctatggttttctcta 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6824 tggtatctgaagggcaggatcctagaagacactcactaaaccaagctatggttttctcta 6765
Query: 242 actataacaactatttgadcgactgtdttttcgacgacagcgtgaaaaccgtggatcaag 301
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 6764 actataacaactatttgaacgactgtattttcgacgacagcgtgaaaaccgtggatcaag 6705
Query: 302 agagaaaactacggcttgaacagttggctgataaattctggctacgcgatgggagtatcg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6704 agagaaaactacggcttgaacagttggctgataaattctggctacgcgatgggagtatcg 6645
Query: 362 acgaggatatgttcgacgaaagcrgtgacgaagagcacgaagaacaggaagaaatttcgc 421
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6644 acgaggatatgttcgacgaaagcagtgacgaagagcacgaagaacaggaagaaatttcgc 6585
Query: 422 accacaaccaccgtcgtagttcgctaacccgcaagagtaagagcgtcctatgatacarat 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 6584 accacaaccaccgtcgtagttcgctaacccgcaagagtaagagcgtcctatgatacaaat 6525
Query: 482 rcactctcacacgtcacgtggatgacaacattacccggaactcacacgaaaaccgtgaaa 541
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6524 acactctcacacgtcacgtggatgacaacattacccggaactcacacgaaaaccgtgaaa 6465
Query: 542 taaacaagaracaaaccctgaaataataaaccagtcatcatcatggtctatctatatgtr 601
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6464 taaacaagaaacaaaccctgaaataataaaccagtcatcatcatggtctatctatatgta 6405
Query: 602 tatkrtcdattagagagacattaatttaattcaaacataacccaaaaatttgctaactaa 661
||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6404 tataatcaattagagagacattaatttaattcaaacataacccaaaaatttgctaactaa 6345
Query: 662 ttaccagcccattcagggatatcccgtctcatctcttactaaacttatgagaccgtccct 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6344 ttaccagcccattcagggatatcccgtctcatctcttactaaacttatgagaccgtccct 6285
Query: 722 cctcttgttaccctagccaccattttagtactacagtttacagtaagaattggatctttt 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6284 cctcttgttaccctagccaccattttagtactacagtttacagtaagaattggatctttt 6225
Query: 782 gtttacgattcacagtacatagtccaataaacaaaacaaaatgtgaaaaacaaccgaaaa 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6224 gtttacgattcacagtacatagtccaataaacaaaacaaaatgtgaaaaacaaccgaaaa 6165
Query: 842 aaacgaaawaactgctatgcgcggatagaaaatagaaatcacttgcaaatccccttccat 901
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6164 aaacgaaaaaactgctatgcgcggatagaaaatagaaatcacttgcaaatccccttccat 6105
Query: 902 ttcccctcgtaccgagaggtcaattgagg 930
|||||||||||||||||||||||||||||
Sbjct: 6104 ttcccctcgtaccgagaggtcaattgagg 6076
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5061
Number of Sequences: 1807
Number of extensions: 5061
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 940
length of database: 10,358,551
effective HSP length: 16
effective length of query: 924
effective length of database: 10,329,639
effective search space: 9544586436
effective search space used: 9544586436
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)